Protein ZmHMG7
ZmHMG7 is a protein in the HMG family.
Information
Coreg Name: ZmHMG7
Species: Maize
Coreg Family: HMG
Gene Name(Synonym): NFD106
Uniprot ID: B6T1S6

Protein ZmHMG7

ZmHMG7 is a protein in the HMG family.

Overview of domains present in v5 transcripts
PF00505PF09011
Zm00001eb198700_T004
Zm00001eb198700_T001
Zm00001eb198700_T005

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d052749DAPseq no logo sequence fimo position
Zm00001d052749DAPseq no logo sequence fimo position
Zm00001d052749ChIPseq no logo sequence fimo position
Zm00001d052749PChIPseq no logo sequence fimo position

Interactions where ZmHMG7 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmHMG7 is the target  
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There are 46 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb198700_T004 from maize genome v5

Amino Acid Sequence
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MAGGKSTGNAARSRKRVEATVLKRSRDGSAFTRCEACNKDVPVVLIDMHSCSLDEKIRMTLEAQVVEKTVEVASADRKKS
SAKGGGNKDAKRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKSMTDEEKKPYIEKAAELKAEAENGEGSG
ENNVATKKAKTDDQEVDQPAKKLRKCKALHEDEDDDGDQEDEDEKNELDDDM

MAGGKSTGNAARSRKRVEATVLKRSRDGSAFTRCEACNKDVPVVLIDMHSCSLDEKIRMTLEAQVVEKTVEVASADRKKS
SAKGGGNKDAKRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKSMTDEEKKPYIEKAAELKAEAENGEGSG
ENNVATKKAKTDDQEVDQPAKKLRKCKALHEDEDDDGDQEDEDEKNELDDDM

MAGGKSTGNAARSRKRVEATVLKRSRDGSAFTRCEACNKDVPVVLIDMHSCSLDEKIRMTLEAQVVEKTVEVASADRKKS
SAKGGGNKDAKRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKSMTDEEKKPYIEKAAELKAEAENGEGSG
ENNVATKKAKTDDQEVDQPAKKLRKCKALHEDEDDDGDQEDEDEKNELDDDM

MAGGKSTGNAARSRKRVEATVLKRSRDGSAFTRCEACNKDVPVVLIDMHSCSLDEKIRMTLEAQVVEKTVEVASADRKKS
SAKGGGNKDAKRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKSMTDEEKKPYIEKAAELKAEAENGEGSG
ENNVATKKAKTDDQEVDQPAKKLRKCKALHEDEDDDGDQEDEDEKNELDDDM

MAGGKSTGNAARSRKRVEATVLKRSRDGSAFTRCEACNKDVPVVLIDMHSCSLDEKIRMTLEAQVVEKTVEVASADRKKS
SAKGGGNKDAKRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKSMTDEEKKPYIEKAAELKAEAENGEGSG
ENNVATKKAKTDDQEVDQPAKKLRKCKALHEDEDDDGDQEDEDEKNELDDDM

MAGGKSTGNAARSRKRVEATVLKRSRDGSAFTRCEACNKDVPVVLIDMHSCSLDEKIRMTLEAQVVEKTVEVASADRKKS
SAKGGGNKDAKRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKSMTDEEKKPYIEKAAELKAEAENGEGSG
ENNVATKKAKTDDQEVDQPAKKLRKCKALHEDEDDDGDQEDEDEKNELDDDM

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF09011
PF00505
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Nucleotide Sequence
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TCCTCCTCCCCCCGCCGCCTGCAAT...

GRMZM2G125648_T01 from maize genome v3


Related TFome: pUT5741

Amino Acid Sequence
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MAGGKSTGNAARSRKRVEATVLKRSRDGSAFTRCEACNKDVPVVLIDMHSCSLDEKIRMTLEAQVVEKTVEVASADRKKS
SAKGGGNKDAKRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKSMTDEEKKPYIEKAAELKAEAENGEGSG
ENNVATKKAKTDDQEVDQPAKKLRKCKALHEDEDDDGDQEDEDEKNELDDDM

Nucleotide Sequence
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CGATCTCCTCTCCCTGCCTGGACAT...

GRMZM2G125648_T02 from maize genome v3

Amino Acid Sequence
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MTDEEKKPYIEKAAELKAEAENGEGSGENNVATKKAKTDDQEVDQPAKKLRKCKALHEDEDDDGDQEDEDEKNELDDDM

Nucleotide Sequence
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CATTCCATTCCATTCCATCTTTTGC...

GRMZM2G125648_T03 from maize genome v3

Amino Acid Sequence
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MHSCSLDEKIRMTLEAQVVEKTVEVASADRKKSSAKGGGNKDAKRKRSPTAFFLFMYAADAARHAHSRILLCSSPS

Nucleotide Sequence
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CGATCTCCTCTCCCTGCCTGGACAT...

GRMZM2G125648_T04 from maize genome v3

Amino Acid Sequence
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MAGGKSTGNAARSRKRVEATVLKRSRDGSAFTRCEACNKDVPVVLIDMHSCSLDEKIRMTLEAQVVEKTVEVASADRKKS
SAKGGGNKDAKRKRSPTAFFLFMYAADAARHAHSRILLCSSPS

Nucleotide Sequence
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CGATCTCCTCTCCCTGCCTGGACAT...

Zm00001d052749_T001 from maize genome v4

Amino Acid Sequence
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MAGGKSTGNAARSRKRVEATVLKRSRDGSAFTRCEACNKDVPVVLIDMHSCSLDEKIRMTLEAQVVEKTVEVASADRKKS
SAKGGGNKDAKRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKSMTDEEKKPYIEKAAELKAEAENGEGSG
ENNVATKKAKTDDQEVDQPAKKLRKCKALHEDEDDDGDQEDEDEKNELDDDM

Nucleotide Sequence
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ATCCATCAATCCTCATCGCCACCCA...

Zm00001eb198700_T001 from maize genome v5

Amino Acid Sequence
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MAGGKSTGNAARSRKRVEATVLKRSRDGSAFTRCEACNKDVPVVLIDMHSCSLDEKIRMTLEAQVVEKTVEVASADRKKS
SAKGGGNKDAKRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKSMTDEKKPYIEKAAELKAEAENGEGSGE
NNVATKKAKTDDQEVDQPAKKLRKCKALHEDEDDDGDQEDEDEKNELDDDM

Nucleotide Sequence
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GTTTTTGATTTGGATCTAGGCGGGG...

Zm00001eb198700_T002 from maize genome v5

Amino Acid Sequence
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MAGGKSTGNAARSRKRVEATVLKRSRDGSAFTRCEACNKDVPVVLIDMHSCSLDEKIRMTLEAQVVEKTVEVASADRKKS
SAKGGGNKDAKRKRSPTAFFLFMYAADAARHAHSRILLCSSPS

Nucleotide Sequence
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GTTTTTGATTTGGATCTAGGCGGGG...

Zm00001eb198700_T003 from maize genome v5

Amino Acid Sequence
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MAGGKSTGNAARSRKRVEATVLKRSRDGSAFTRCEACNKDVPVVLIDMHSCSLDEKIRMTLEAQVVEKTVEVASADRKKS
SAKGGGNKDAKRKRSPTAFFLFMYAADAARHAHSRILLCSSPS

Nucleotide Sequence
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GTTTTTGATTTGGATCTAGGCGGGG...

Zm00001eb198700_T005 from maize genome v5

Amino Acid Sequence
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MAGGKSTGNAARSRKRVEATVLKRSRDGSAFTRCEACNKDVPVVLIDMHSCSLDEKIRMTLEAQVVEKTVEVASADRKKS
SAKGGGNKDAKRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKSMTDEVSPESESVEFPTLALHSFIHAML
FIFLDQEKKPYIEKAAELKAEAENGEGSGVSPSSFLCLLLSFCGHCHV

Nucleotide Sequence
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TCCTCCTCCCCCCGCCGCCTGCAAT...


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